My Name is Maxime Branger, and I am a Bio-Analyst

I early found my way in biology. My studies gave me a chance to join a research team quickly. I work on Mycobacterias for 8 years, espacially on those are pathogens for animals.
The quick evolution of technology on genomics and my good feeling with informatics directed me to bio-informatics. My work gave me a chance to come back to school for a year and improove my skills on it.
I joined the Migale Plateforme for a year in september 2017, a specialised team on bio-informatics.
More details on my studies, experiences and skills below.

Studies

Degrees

2010 - Baccalauréat STL opt. Biochimie et Génie Biologique (Lycée Grammont, Tours)
2012 - DUT Génie Biologique opt. Analsyes Biologiques et Biochimiques (IUT de Tours)
2018 - LP Biotechnologies parcours Génomique (ENCPB-CNAM, Paris 13)
2018 - TOEIC, Listening and Reading - 835 pts

Non-certificated training

2015 - Command Line Tools for Genomic Data Science (J-H Univ - Coursera) - 57.8% [MOOC]
2015 - Python : Fundamental to the use of language (INRIA - FUN) - 39% [MOOC]
2016 - Python : Fundamentals [MOOC]
2018 - Master the Bash shell [MOOC] - certified 78% 2021 - FAIR and Open Science [IFB]

Knowledges

Websites

Professionals

MAC-INMV Database - Mycobacterium avium Complex's Genotyping (MIRU-VNTR) - 2015 [merged with MAC-SSR to MAC-INMV-SSR in 2020]
MAC-SSR Database - Mycobacterium avium Complex's Genotyping (SSR) - 2016 [merged with MAC-INMV to MAC-INMV-SSR in 2020]
MBOV-TYPE Database - Mycobacterium bovis Genotyping (MLVA-Spologtyping) - 2016 [deleted]

Hoobies

Pronos UTBM - UTBM Pronostics (Union Tours Basket Metropôle) - 2016 [deleted]
Pronostics ITS - Pronostics InfosTouraineSport - 2017 [deleted]

Since 09-2020 - Technician - Bio-analyst (research)

Work : bio-informatics, genome assembly, SNP calling
¤ More informations about the team : Plasticité génomique, biodiversité, antibiorésistance
¤ More informations about the unit : INRA - UMR ISP

12-2018 to 09-2020 - Technician - Bio-analyst (research)

Work : bio-informatics, genome assembly, SNP calling
¤ More informations about the team : INRA - Animal mycobacterial Infections
¤ More informations about the unit : INRA - UMR ISP

09-2017 to 09-2018 - Lab assistant (research trainee)

Work : BioInformatics, Data analysis, Genomics
¤ More informations about the team : INRA - Plateforme Migale
¤ More informations about the unit : INRA - UR Maiage

09-2013 to 09-2020 - Lab assistant (research)

Work : Bacteriological cultures, molecular biology, biochemistry, bio-informatics
¤ More informations about the team : INRA - Animal mycobacterial Infections
¤ More informations about the unit : INRA - UMR ISP

01-2013 to 09-2013 - Lab assistant (university)

Practical Work preparation : Cellular and bacteriological cultures, biochemistry

11-2012 to 01-2013 - Lab assistant (college)

Practical Work preparation : Life Science and Earth

2021

Leclercq S. et al. Microb Genom. 2021 Sep - Lipopolysaccharide core type diversity in the Escherichia coli species in association with phylogeny, virulence gene ...
Conde C. et al. Microbiol Resour Announc. 2021 Sep 23 - Draft Genome Sequences of 142 Mycobacterium avium subsp. paratuberculosis Strains Isolated ...
Conde C. et al. Front Microbiol. 2021 May 10 - Whole-Genome Analysis of Mycobacterium avium subsp. paratuberculosis IS900 Insertions ...
Bay S. et al. Front. Vet. Sci. 2021 Apr 23 - Engineering Synthetic Lipopeptide Antigen for Specific Detection of Mycobacterium avium subsp...

2020

Bannantine JP. et al. Front Microbiol. 2020 Aug 7 - Genetic Diversity Among Mycobacterium avium subsp. Revealed ...
Lefrancois LH et al. Microorganisms 2020 Jul 30 - Feature of Adhesins Produced by Human Clinical Isolates of Mycobacterium intracellulare ...
Branger M. et al. Infect. Genet. Evol. 2020 Mar. 30 - The complete genome sequence of Mycobacterium bovis Mb3601 ...
Beauruelle C. et al. Microbiol Resour Announc 2020 Jan. 30 - Whole-Genome Sequencing Confirms the Coexistence of ...

2019

Michelet L. et al. Microorganisms 2019 Dec. 12 - Transmission Network of Deer-Borne Mycobacterium bovis ...
Cochard T. - Branger M. et al. Infect Genet Evol. 2019 Oct 18 - MAC-INMV-SSR: a web application dedicated to genotyping ...
Hauer A. et al. Front. Microbiol. 2019 May 03 - Accurate Phylogenetic Relationships Among Mycobacterium bovis Strains ...

2018

Samba-Louaka A. et al. Front. Cell. Infect. Microbiol. 2018 Feb 09 - Environmental Mycobacterium avium ...

2017

Bannantine JP. et al. Mol Microbiol. 2017 May 30 - Cell Wall Peptidolipids of Mycobacterium avium ...
Branger M. et al. Genome Announc. 2017 Jul 6 - Draft Genome Sequences of Three Mycobacterium bovis ...

2016

Hauer A. et al. Infect Genet Evol. 2016 Sep 1 - MIRU-VNTR allelic variability depends on Mycobacterium ...
Branger M. et al. Genome Announc. 2016 Nov 10 - Draft Genome Sequence of Mycobacterium bovis ...

2015

Carlos P. et al. J Theor Biol. 2015 Nov 7 - In silico epitope analysis of unique ...
Holbert S. et al. Res Vet Sci. 2015 Oct - Interferon gamma response to Mycobacterium ...

2020 - Pint of Science - Tours

Local coordinator for Tours events.

2019 - Pint of Science - Tours

Member of organizing team for Tours events.

2017 - 2019 - InfosTouraineSport - Tours

http://infostourainesport.fr/